Making other carbon compounds and interdependence of the reactions

Molecules (Interaction and interdependence) · Photosynthesis · note 9 of 9

Spec C1.3.18, C1.3.19
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Making other carbon compounds and interdependence of the reactionsSpec C1.3.18, C1.3.19

In short

All the carbon in compounds in photosynthesising organisms is fixed in the Calvin cycle. Triose phosphate and other cycle intermediates, with mineral nutrients such as nitrate and phosphate, are used to make carbohydrates, amino acids and other carbon compounds. The light-dependent and light-independent reactions are interdependent: without light, ATP and reduced NADP run out; without CO₂, NADP is not regenerated.

Synthesis of other carbon compounds

All of the carbon in compounds in photosynthesising organisms is fixed in the Calvin cycle. Glucose is only one product. Other carbon compounds are made by metabolic pathways that can be traced back to an intermediate in the cycle, usually triose phosphate. You do not need the details of these pathways.

Carbon compounds made from Calvin cycle products
ProductMade fromMineral nutrients also needed
Glucose, sucrose, starch, celluloseTriose phosphateNone
Fatty acids and glycerol (lipids)Triose phosphate and other intermediatesNone (phosphate for phospholipids)
Amino acids (proteins)Calvin cycle intermediatesNitrogen (nitrate or ammonium); sulfur for some
Nucleotides (DNA, RNA, ATP)Calvin cycle intermediatesNitrogen and phosphate

Interdependence of the light-dependent and light-independent reactions

The light-dependent reactions supply ATP and reduced NADP to the Calvin cycle; the Calvin cycle returns ADP, phosphate and NADP. Neither can continue for long without the other.

  • Lack of light stops the light-dependent reactions, so no ATP or reduced NADP is made. GP cannot be converted to TP, so GP accumulates and RuBP is not regenerated. The Calvin cycle stops.
  • Lack of CO₂ stops carbon fixation, so ATP and reduced NADP are not used. NADP is not regenerated, so photosystem I has no electron acceptor and the electron carriers stay reduced. Electrons from photosystem II cannot be passed on, so photosystem II stops functioning, and photolysis and oxygen production stop.
Two boxes: the light-dependent reactions (thylakoids), taking in light and water and releasing oxygen, supply ATP and reduced NADP to the Calvin cycle (stroma), which takes in CO₂, produces triose phosphate and returns ADP + Pi and NADP; callouts explain that without light GP builds up and the cycle stops, and without CO₂ no NADP is returned so photosystem II cannot pass on electrons. (opens full size in a new tab)
The two sets of reactions depend on each other: ATP and reduced NADP go one way, ADP, Pi and NADP come back.
Exam tip:

For a change in conditions, predict what builds up and what runs out. Darkness: GP rises and RuBP falls. Low CO₂: RuBP rises and GP falls.

Quick check

  1. Write the word equation for photosynthesis.

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    carbon dioxide + water → glucose + oxygen

  2. Where does the oxygen released by photosynthesis come from?

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    The splitting of water.

  3. How is an Rf value calculated?

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    Distance moved by the pigment ÷ distance moved by the solvent front.

  4. What is the difference between an absorption spectrum and an action spectrum?

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    An absorption spectrum shows light absorbed by a pigment at each wavelength; an action spectrum shows the rate of photosynthesis at each wavelength.

  5. HL only What are the substrates and product of the reaction catalysed by Rubisco?

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    Substrates: RuBP and CO₂. Product: glycerate 3-phosphate (GP).

Written and checked against the IB Biology HL specification · Updated October 2026

Frequently asked questions

Why do plants absorb red and blue light but not green?

Chlorophyll absorbs mainly red and blue light because only photons with energy matching the gaps between its electron energy levels can excite its electrons. Green light does not match well, so most of it is reflected or transmitted, which is why leaves look green. Accessory pigments such as carotenoids absorb some other wavelengths.

What is the difference between an absorption spectrum and an action spectrum?

An absorption spectrum shows the percentage of light a pigment absorbs at each wavelength, while an action spectrum shows the rate of photosynthesis at each wavelength. Both peak in blue and red light. The action spectrum stays above zero in green light because accessory pigments absorb some of it, and the similar shapes show absorbed light drives photosynthesis.

How do you calculate Rf values in chromatography?

Divide the distance moved by the pigment by the distance moved by the solvent front, both measured from the origin line. Rf values lie between 0 and 1 and have no units. Pigments are identified by their colour and by comparing their Rf values with reference values for the same solvent and medium.

All 5 questions on Photosynthesis

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