Modification of polypeptides and proteasomes

Molecules (Continuity and change) · Protein synthesis · note 8 of 8

Spec D1.2.18, D1.2.19
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Modification of polypeptides and proteasomesSpec D1.2.18, D1.2.19

In short

Many polypeptides must be modified before they can function. Insulin is made in two stages: the signal sequence is removed from pre-proinsulin to give proinsulin, which folds and forms disulfide bonds, then the C-peptide is cut out, leaving two chains. Proteasomes break down proteins into short peptides, so amino acids are recycled and a functional proteome is sustained.

The polypeptide released from the ribosome is often not yet functional. It may need to be folded, cut, joined to other polypeptides or have other groups (such as carbohydrates) added.

Pre-proinsulin to insulin

  1. Translation on ribosomes of the rough endoplasmic reticulum produces pre-proinsulin. It has a signal sequence at its amine end that directs it into the endoplasmic reticulum.
  2. Stage 1: the signal sequence is removed in the endoplasmic reticulum, giving proinsulin. Proinsulin folds and three disulfide bonds form.
  3. Stage 2: in the Golgi apparatus and secretory vesicles, enzymes cut out the middle section, the C-peptide.
  4. The remaining two chains, the A chain (21 amino acids) and B chain (30 amino acids), stay linked by disulfide bonds. This is active insulin, which is secreted.

Recycling of amino acids by proteasomes

The proteome is the set of all proteins produced by a cell. Proteins are constantly being damaged or misfolded, or are no longer needed. Such proteins are first tagged for destruction (with a small protein called ubiquitin). Proteasomes, large barrel-shaped protein complexes in the cytoplasm and nucleus, recognise the tag and hydrolyse the tagged protein into short peptides. Other enzymes (peptidases) break the peptides into amino acids, which are reused in protein synthesis.

Sustaining a functional proteome requires constant protein breakdown and synthesis. Breakdown removes faulty proteins and allows the cell to change which proteins it contains as conditions change.

Bead chains for three stages: pre-proinsulin as a single chain of signal sequence, B chain, C-peptide and A chain from the N to the C end; proinsulin after the signal sequence is removed in the ER, folded with three disulfide bonds; and insulin after the C-peptide is cut out in the Golgi apparatus and secretory vesicles, with the A chain (21 amino acids) and B chain (30 amino acids) joined by two disulfide bonds and one disulfide bond within the A chain. (opens full size in a new tab)
Insulin is made from one polypeptide, pre-proinsulin, by removing the signal sequence and then the C-peptide.
Common mistake:

Insulin is two polypeptide chains, but they come from a single gene and a single polypeptide (pre-proinsulin). The chains are separated by cutting, not translated separately.

Quick check

  1. Which base on RNA pairs with adenine on the DNA template strand?

    Show answer

    Uracil.

  2. Why must DNA in non-dividing somatic cells stay unchanged by transcription?

    Show answer

    The same sequences must be transcribed throughout the life of the cell, so they must be conserved.

  3. What is meant by the degeneracy of the genetic code?

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    More than one codon can code for the same amino acid.

  4. How many tRNAs can bind to the large ribosomal subunit at once?

    Show answer

    Two.

  5. HL only What is removed from proinsulin to produce insulin?

    Show answer

    The C-peptide.

Written and checked against the IB Biology HL specification · Updated October 2026

Frequently asked questions

What is the difference between transcription and translation?

Transcription is the synthesis of RNA using a DNA template, carried out by RNA polymerase in the nucleus of eukaryotes. Translation is the synthesis of a polypeptide from mRNA at a ribosome, where tRNA anticodons pair with mRNA codons and amino acids are joined by peptide bonds. Transcription copies the sequence; translation decodes it.

Why is the genetic code a triplet code?

The genetic code is a triplet code because there are four bases and twenty amino acids. Pairs of bases would give only 4² = 16 combinations, too few for twenty amino acids. Triplets give 4³ = 64 codons, enough for every amino acid plus start and stop signals, which is why the code is also degenerate.

How does sickle-cell anaemia change the haemoglobin protein?

Sickle-cell anaemia is caused by a base substitution in the haemoglobin beta-chain gene. The mRNA codon changes from GAG to GUG, so valine replaces glutamic acid at the sixth amino acid. This hydrophobic valine makes haemoglobin S molecules stick together into fibres at low oxygen, distorting red blood cells into sickle shapes.

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