The Golgi apparatus and vesicles

Cells (Form and function) · Organelles and compartmentalization · note 4 of 4

Spec B2.2.8, B2.2.9
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The Golgi apparatus and vesiclesSpec B2.2.8, B2.2.9

In short

The Golgi apparatus is a stack of flattened membrane sacs that processes proteins from the rough ER and packages them into vesicles for secretion. Vesicles are small membrane-bound sacs that carry materials around the cell. The protein clathrin forms a cage-like coat on the cytoplasmic side of a membrane, curving it into a bud that pinches off as a vesicle.

The Golgi apparatus

The Golgi apparatus is a stack of flattened, curved membrane sacs (cisternae) that are not joined to each other. Vesicles from the rER fuse with the cis face, nearest the rER. Proteins are processed as they pass through the cisternae, for example by adding or changing carbohydrate chains to make glycoproteins. At the trans face, processed proteins are packed into vesicles that bud off.

  1. A protein is made by ribosomes on the rER and enters the rER lumen.
  2. Vesicles bud off the rER and carry the protein to the cis face of the Golgi apparatus.
  3. The protein is processed as it moves through the Golgi cisternae.
  4. Secretory vesicles bud from the trans face and move to the plasma membrane.
  5. The vesicle membrane fuses with the plasma membrane and the protein is released by exocytosis.

Cells that secrete a lot of protein, such as pancreatic cells that make digestive enzymes and plasma cells that make antibodies, have extensive rER and a large Golgi apparatus.

Vesicles and clathrin

Vesicles are small spheres of membrane enclosing fluid. They carry materials within the cell (for example from the rER to the Golgi apparatus), carry proteins for secretion, deliver hydrolytic enzymes as lysosomes and bring material in by endocytosis. Because membranes are fluid, vesicles can bud off one membrane and fuse with another.

Clathrin is a protein that helps vesicles form. Clathrin molecules assemble into a basket-shaped lattice on the cytoplasmic side of a membrane: at the plasma membrane during endocytosis, and at the trans face of the Golgi apparatus for vesicles carrying enzymes towards lysosomes. The lattice pulls the membrane into a curved pit that deepens and pinches off as a clathrin-coated vesicle. The coat is then removed so the vesicle can fuse with its target membrane. Vesicles travelling from the rER to the Golgi apparatus use different coat proteins, whose names are not required.

Secretory pathway from rough ER through a transport vesicle to the cis face of the Golgi apparatus, through the cisternae to the trans face, then secretory vesicles to the plasma membrane where exocytosis releases protein; a clathrin-coated vesicle leaves the trans face towards a lysosome. Inset: a clathrin-coated pit forming at the plasma membrane, deepening, pinching off as a clathrin-coated vesicle and losing its coat. (opens full size in a new tab)
rER → Golgi → secretory vesicle → exocytosis. Clathrin coats vesicles at the plasma membrane and the trans face of the Golgi apparatus.
Common mistake:

The Golgi apparatus does not make proteins. Ribosomes on the rER make them; the Golgi apparatus processes them and packages them into vesicles.

Quick check

  1. Name two structures that are not considered organelles.

    Show answer

    Any two of: the cell wall, the cytoskeleton, the cytoplasm.

  2. In cell fractionation, which organelles form a pellet first, at the lowest speed?

    Show answer

    Nuclei.

  3. Why must the hydrolytic enzymes of lysosomes be kept in a compartment?

    Show answer

    So they do not digest the cell's own molecules, and so they can be concentrated at their acid optimum pH.

  4. HL only Which part of the mitochondrion contains the enzymes of the Krebs cycle?

    Show answer

    The matrix.

  5. HL only What is the role of clathrin?

    Show answer

    It forms a coat that curves a membrane into a bud, forming a vesicle.

Written and checked against the IB Biology HL specification · Updated October 2026

Frequently asked questions

Is a ribosome an organelle?

Yes. In IB Biology an organelle is a discrete subunit of a cell adapted to perform a specific function, so ribosomes count even though they have no membrane. Nuclei, vesicles and the plasma membrane are organelles too, but the cell wall, cytoskeleton and cytoplasm are not considered organelles.

What are the advantages of compartmentalization in cells?

Compartments let a cell concentrate enzymes and their substrates in a small volume, so reactions run faster, and keep incompatible processes apart. For example, lysosomes hold hydrolytic enzymes that would digest the cell if free, and the nuclear membrane lets mRNA be modified before it meets ribosomes.

How does cell fractionation separate organelles?

Cell fractionation breaks cells open in a cold, isotonic, buffered solution and then spins the homogenate in a centrifuge at increasing speeds. Large, dense organelles such as nuclei form a pellet first; mitochondria pellet at higher speeds, and the smallest parts, such as ribosomes, need an ultracentrifuge. Each fraction can then be studied.

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