Imaging the brain: CT, MRI, fMRI and PET

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Imaging the brain: CT, MRI, fMRI and PETSpec 8.15

In short

CT uses X-rays to build images of brain structure, and MRI uses magnetic fields and radio waves to give detailed soft-tissue images. fMRI detects changes in blood oxygen to map active areas, and PET uses a radioactive tracer to show where the brain uses glucose. They diagnose disease and investigate brain function.

Brain imaging techniques
TechniqueHow it worksWhat it shows and usesAdvantages and limitations
CT (computed tomography)An X-ray source rotates around the head. Detectors measure how much is absorbed by tissues; a computer builds cross-sectional slices.Brain structure: bone, tumours, bleeding in stroke or head injuryQuick and widely available. Uses ionising radiation; poorer soft-tissue contrast than MRI; shows structure, not activity.
MRI (magnetic resonance imaging)A strong magnetic field aligns hydrogen nuclei in water. A pulse of radio waves knocks them out of line; they emit signals as they return, which differ between tissues.Detailed images of soft tissue: tumours, damage to brain tissue, multiple sclerosis, structural abnormalitiesNo ionising radiation and high resolution. Slow, noisy, expensive; cannot be used with some metal implants or pacemakers.
fMRI (functional MRI)MRI that detects changes in blood oxygen. Active neurones use more oxygen, so blood flow to them increases, which changes the signal.Which parts of the brain are active during a task, such as speaking or moving a handShows function as well as structure and uses no radiation. Indirect measure of activity; expensive; the person must keep still.
PET (positron emission tomography)A radioactive tracer, such as a glucose analogue labelled with a positron emitter, is injected. Active cells take up more of it. Detectors record the gamma rays produced.Metabolic activity, such as areas that are abnormally active or inactive in epilepsy, dementia or tumoursShows chemical activity. Uses radioactivity; costly; the tracer has a short half-life, so it must be made close to the scanner.
Four brain scans side by side: CT showing structure, MRI showing soft tissue detail, fMRI showing active areas during a task and PET showing glucose uptake. (opens full size in a new tab)
CT and MRI show structure; fMRI and PET show activity.Images: Mikael Häggström, CC0 (CT); everyone's idle, CC BY-SA 2.0 (MRI); Ovaysikia et al., CC BY 2.5 (fMRI); US National Institute on Aging, Public domain (PET); via Wikimedia Commons
Exam tip:

Choose the scan by what the question asks: structure (CT or MRI) or function (fMRI or PET). Then give a reason and a limitation, because ‘evaluate’ questions need both.

Written and checked against the Edexcel International A Level Biology (YBI11) specification · Updated October 2026

Frequently asked questions

What is the difference between nervous and hormonal coordination?

Nervous coordination uses electrical impulses along neurones to produce fast, short-lived responses in specific effectors. Hormonal coordination uses chemicals released into the blood, which act more slowly and last longer on any target cells with receptors. The hypothalamus links the two systems by controlling the pituitary gland.

What do the different parts of the brain do?

The cerebral hemispheres control conscious thought, memory and voluntary movement. The hypothalamus regulates temperature, water balance and the pituitary gland. The pituitary secretes hormones. The cerebellum coordinates movement and balance, and the medulla oblongata controls involuntary actions such as heart rate and breathing rate.

What is the difference between MRI and fMRI?

MRI uses a magnetic field and radio waves to make detailed images of brain structure. fMRI uses the same scanner to detect changes in blood oxygen level in the brain over time. Active neurones use more oxygen, so fMRI shows which parts of the brain are working during a task.

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