Core practical 18: amylase in germinating cereal grains

Coordination, Response and Gene Technology · Plant responses · note 4 of 4

Spec 8.12
A Level only (what this means)A Level only: only in the full A Level, not the AS Level. AS Level students can skip it. What the labels mean
Download all Plant responses notes (PDF)Download all notes (PDF)7 pages

Core practical 18: amylase in germinating cereal grainsSpec 8.12

In short

In core practical 18, halves of germinating cereal grains are placed on starch agar. Amylase made in the grains digests the starch, so after flooding with iodine solution a clear zone forms around each half. The size of the clear zone shows how much amylase was produced, and the roles of the embryo and gibberellin can be tested.

Core practical:

Core practical 18: investigate the production of amylase in germinating cereal grains. Your teacher may use a variant of the method below, so check which apparatus and treatments you used.

The aim is to show that the germinating grain produces amylase, and that the embryo (through gibberellin) is needed to switch on its production.

  1. Prepare agar plates containing starch, using sterile technique.
  2. Surface-sterilise germinating barley grains (for example by soaking them briefly in dilute bleach and rinsing in sterile water), because bacteria and fungi on the grains also make amylase.
  3. Cut the grains in half across the middle with a scalpel on a tile. One half contains the embryo, the other does not.
  4. Place halves cut side down on the agar. For example: embryo halves; embryo-free halves; embryo-free halves with gibberellin solution; boiled embryo halves as a control.
  5. Incubate at a constant temperature (for example 25 °C) for 24 to 48 hours.
  6. Remove the grain halves and flood the plates with iodine in potassium iodide solution for a minute, then pour the excess off.
  7. Starch turns blue-black. A clear zone where starch has been digested by amylase appears around each half. Measure the diameter of each clear zone.
Variables and controls
TypeDetail
Independent variableTreatment of the grain half (embryo present or absent, gibberellin added or not)
Dependent variableDiameter, or area, of the clear zone / mm or mm²
Controlled variablesAge, mass and type of grain; concentration and volume of starch agar; temperature; incubation time; volume and concentration of gibberellin and iodine
ControlsBoiled embryo halves (enzyme and gibberellin denatured) and agar with no grain, showing that the clear zone is caused by living tissue producing amylase
SafetyScalpel: cut away from the body on a tile. Iodine solution stains and irritates: wear eye protection and wash spills. Sterile technique: tape the lids during incubation, open plates only briefly to remove the grains and add iodine, dispose of plates safely (for example by autoclaving) and wash hands.

To process results, measure the diameter of each clear zone in two directions at right angles and take the mean. Calculate the area from πr² and compare the mean area for each treatment. Repeat each treatment several times to identify anomalies and calculate a mean. Because a clear zone is only a rough measure of the amount of amylase, results are semi-quantitative.

Area of a clear zone

A clear zone has a mean diameter of 14 mm. Calculate its area.

  1. radius = 14 ÷ 2 = 7 mm
  2. area = πr² = π × 7² = π × 49

Answer: 154 mm² (to 3 significant figures)

Maths skill:

Area of a circle = πr². Halve the diameter first, then square the radius, and give units (mm²).

Petri dish of starch agar stained blue-black with iodine, with four grain halves: embryo half and embryo-free half plus gibberellin have clear zones; embryo-free half and boiled embryo half have none. The diameter of a clear zone is marked. (opens full size in a new tab)
Core practical 18: clear zones show where amylase has digested the starch.

Quick check

  1. Which wavelength of light converts Pr to Pfr?

    Show answer

    Red light (about 660 nm).

  2. Which form of phytochrome is active?

    Show answer

    Pfr.

  3. How does auxin make cells elongate?

    Show answer

    It increases proton pumping into the cell wall; the acidic wall becomes more extensible and the cell takes in water.

  4. Where is amylase made in a germinating cereal grain?

    Show answer

    In the aleurone layer, under the control of gibberellin from the embryo.

Written and checked against the Edexcel International A Level Biology (YBI11) specification · Updated October 2026

Frequently asked questions

What is phytochrome and what does it do?

Phytochrome is a light-sensitive protein pigment in plants that exists as Pr and Pfr. Red light converts Pr to the active Pfr, and far-red light converts it back. Pfr moves into the nucleus and changes which genes are transcribed, controlling responses such as seed germination, stem elongation and flowering.

How does auxin cause phototropism?

Auxin (IAA) is moved to the shaded side of a shoot by carrier proteins. There it increases proton pumping into cell walls and switches on genes for elongation, so the cells on the shaded side elongate more than those on the lit side. The shoot therefore bends towards the light.

How do gibberellins affect seed germination?

In a cereal grain, the embryo releases gibberellin, which diffuses to the aleurone layer and switches on transcription of the amylase gene. The amylase digests starch in the endosperm to maltose and glucose, which the embryo uses in respiration for energy and growth.

All 4 questions on Plant responses

Finished plant responses? Test yourself:Exam questionsFlashcards